Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIAAFDIGGTALKMGVVLPHGEIILTKSAEISGSDGDQILAEMKVFLAENTDVTGIAVSAPGYVNPKTGLITMGGAIRRFDNFNLKEWLEAETGLPVAIENDANCALLAEKWLGKGQDLDDFLCLTIGTGIGGGIFSNGELVRGGRFRAGEFGYMFSERPGAFRPGKYTLNETTTMLVLRRQYAELTGRPLEEITGEEIFANYDAHDAVSERLITEFYTGICTGLYNLIYLFDPTHIFIGGGITSRPTFIAELKHHMESFGLRDTIIETATHKNQAGLLGAVYHFLQEENRHE
4HTL Chain:A ((5-294))
-KIAAFDIGGTALKMGVVLPHGEIILTKSAEISGSDGDQILAEMKVFLAENTDVTGIAVSAPGYVNPKTGLITMGGAIRRFDNFNLKEWLEAETGLPVAIENDANCALLAEKWLGKGQDLDDFLCLTIGTGIGGGIFSNGELVRGGRFRAGEFGYMFSERPGAFRPGKYTLNETTTMLVLRRQYAELTGRPLEEITGEEIFANYDAHDAVSERLITEFYTGICTGLYNLIYLFDPTHIFIGGGITSRPTFIAELKHHMESFGLRDTIIETATHKNQAGLLGAVYHFLQEEN---
General information:
TITO was launched using:
RESULT:
Template:
4HTL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -201798 for 2438 contacts (-82.8/contact) +
2D Compatibility (PS) -31569 + (NN) -21099 + (LL) 456
1D Compatibility (HY) -40800 + (ID) 14500
Total energy: -309310.0 ( -126.87 by residue)
QMean score : 0.603
(partial model without unconserved sides chains):
PDB file :
Tito_4HTL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HTL-query.scw
PDB file :
Tito_Scwrl_4HTL.pdb
: