Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNIMLMCNAGMSTSVLVRKMERVVEERNLELTIWAISETDFEKNWRKADAILLGPQVNYMKDKVIDTVGD--NVSVAVIDIVDYGRMNGEKVLDLAISLL
4MGE Chain:A ((2-98))
--NILLCCSAGMSTSLLVTKMEAAAKARGLEGKIWAVSGDAVKTNIDQADVLLLGPQVRYMLSS-MKTLADERNVGIDVINPMHYGMMNGEAVLDHALTL-
General information:
TITO was launched using:
RESULT:
Template:
4MGE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -88709 for 727 contacts (-122.0/contact) +
2D Compatibility (PS) -10131 + (NN) -878 + (LL) 640
1D Compatibility (HY) -12000 + (ID) 2500
Total energy: -113578.0 ( -156.23 by residue)
QMean score : 0.635
(partial model without unconserved sides chains):
PDB file :
Tito_4MGE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4MGE-query.scw
PDB file :
Tito_Scwrl_4MGE.pdb
: