Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ----------------------------------------------------------------------------------------------------------------MFMEKKHFDLNDVVEMKKPHPCGTNRFKIIRMGMDIRIKCEGCGHSVMIPRREFERKVKKILVKAEQE-------------------------------------------------------------------------------------------------------------------------------- |
1G9M Chain:G ((5-321)) | EVVLVNVTENFNMWKNDMVEQMHEDIISLWDQSLKPCVKLTPLCVGAGSCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCNNKTFNGTGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAE--EEVVIRSVNFTDNAKTIIVQLNTSVEINCTGAGH-CNISRAKWNNTLKQIASKLREQFGNNKTIIFKQSSGGDPEIVTHSFNCGGEFFYCNSTQLFNSTWFNGSDTITLPCRIKQIINMWQKVGKAMYAPPISGQIRCSSNITGLLLTRDGGNSNNESEIFRPGGGDMRDNWRSELYKYKVVKIE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1G9M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -9595 for 317 contacts (-30.3/contact) +
2D Compatibility (PS) -7443 + (NN) -3676 + (LL) 68
1D Compatibility (HY) -2800 + (ID) 600
Total energy: -24046.0 ( -75.85 by residue)
QMean score : 0.376
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