Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKGLGKGINALFNNVDTNEETVQNIAIKEIKPNPYQPRKIFDAKAINELRDSIKIHGVLQPIILRNTDKGYEIVVGERRYRAAKEAKLKEIPAVVRDLTEEEMMELSVIENLQREDLSPLEEAESYQFLMKKLSLTQAKLAERVGKSRPYIANFVRLLTLPEEVQVMLRDGSLSAGHGRVLLGLKLKKNIIPTAKKAVAQGLTVRQLEDVVNNLNENVSRETIKPARVPIFIRESESQLRDKFGTAVSIKRRDKKGKIEIEFLSDDDLDRILEILDIQFDDE |
| 1VZ0 Chain:A ((23-208)) | ----------------------VVRLPLASIRPNPRQPRKRFAEESLKELADSIREKGLLQPLLVRPQGDGYELVAGERRYRAALMAGLQEVPAVVKDLTDREALELALVENLQREDLSPVEEARGYQALLE-MGLTQEEVARRVGKARSTVANALRLLQLPPEALEALERGEITAGHARALLMLE-PEDRLWGLKEILEKGLSVRQAEA------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VZ0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -68829 for 1211 contacts (-56.8/contact) +
2D Compatibility (PS) -20408 + (NN) -8401 + (LL) 6304
1D Compatibility (HY) -14400 + (ID) 4700
Total energy: -110434.0 ( -91.19 by residue)
QMean score : 0.623
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