Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRGYYDEISFDVNTTAKKMHLFLLRSIASYDVTPEQWSVLE-GIEANEPISQKEIALWTKKDTPTVNRIVDVLLRKELIVREISTEDRRISLLSLTEKGRKETNELRDIVEVSCEKMFAGVERADLEQFTAILKNISTNIE
3FM5 Chain:A ((11-142))
-----DDIGFLLSRVGGMVLGAVNKALVPTGLRVRSYSVLVLACEQAEGVNQRGVAATMGLDPSQIVGLVDELEERGLVVR-----------IAATEEGRRLRDDAKARVDAAHGRYFEGIPDTVVNQMRDTLQSIA----
General information:
TITO was launched using:
RESULT:
Template:
3FM5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47606 for 771 contacts (-61.7/contact) +
2D Compatibility (PS) -12331 + (NN) -1281 + (LL) 1512
1D Compatibility (HY) -6000 + (ID) 1350
Total energy: -67056.0 ( -86.97 by residue)
QMean score : 0.566
(partial model without unconserved sides chains):
PDB file :
Tito_3FM5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FM5-query.scw
PDB file :
Tito_Scwrl_3FM5.pdb
: