Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VEMDPNTDLSSVTRPRATPVLTTFQFDSGKVGHIWTTFSEDQIDLNFACPEVLYKMIDVLMFYLEEGAEYVRLDAVGFMWKVPGTSSIHLEETHEIVKLFRDLVDIAAPGTIIITETNVPHVDNISYFGNGEKEAHMVYQFPLPPLVLHAIHHGNAKFLRNWAKNLEL-PEGKRTFFNFLASHDGIGLNPVRGII------PEAEILALVNDLEEEG-----ALVSYKQNPDGSKSPYEINVTYMDALSKQADTDDLRLARFLVAHAVLMSIPGVPAVYVQSILGSRNDYLGVEA---TSHNRSINRKKYDLAEITAELEQRGSLRKATYDALTKLISTRKAESLFHPEIPMEVLE-STAELFVVKRSSDAESIILIHNLSEKEVSYSLDS-----GVYTNLYKGSTVTGSDSIKLSGYEFCWLKTKNYREEQK |
| 1G5A Chain:A ((242-627)) | -----------------------------DGRWVWTTFNSFQWDLNYSNPWVFRAMAGEMLFLANLGVDILRMDAVAFIWKQMGTSCENLPQAHALIRAFNAVMRIAAPAVFFKSEAIVHPDQVVQYIGQ--DECQIGYNPLQMALLWNTLATREVNLLHQALTYRHNLPEH-TAWVNYVRSHDDIGWTFADEDAAYLGISGYDHRQFLNRFFVNRFDGSFARGVPFQYNPST--GDCRVSGTAAALVGLAQ-DDPHAVDRIKLLYSIALSTGGLPLIYLGDEVGTLNDDDWSQDSNKSDDSRWAHRPRYNEALY-AQRNDPSTAAGQIYQDLRHMIAVRQSNPRFDGG-RLVTFNTNNKHIIGYIRNN---ALLAFGNFSEYPQTVTAHTLQAMPFKAHDLIGGKTVSLNQDLTLQPYQVMWLEI-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1G5A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -192628 for 2870 contacts (-67.1/contact) +
2D Compatibility (PS) -39535 + (NN) -18273 + (LL) 2196
1D Compatibility (HY) -17600 + (ID) 4100
Total energy: -269940.0 ( -94.06 by residue)
QMean score : 0.424
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