Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKKYRIKKNDDFQKVFRRGKSFANRQFVVYTLKQEGSNHFRIGLSVSKKIGNAVCRNRIKRYIRQSFHELESQINPENEYIIIARKPAANMDFHEVKKSLIHVLKVGRVLKQKPNNSK
1A6F Chain:A ((4-108))
LKKRNRLKKNEDFQKVFKHGTSVANRQFVLYTLDQPENDELRVGLSVSKKIGNAVMRNRIKRLIRQAFLEEKERLK-EKDYIIIARKPASQLTYEETKKSLQHLFR-------------
General information:
TITO was launched using:
RESULT:
Template:
1A6F.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51239 for 751 contacts (-68.2/contact) +
2D Compatibility (PS) -10863 + (NN) -2907 + (LL) 332
1D Compatibility (HY) -11200 + (ID) 3200
Total energy: -79077.0 ( -105.30 by residue)
QMean score : 0.704
(partial model without unconserved sides chains):
PDB file :
Tito_1A6F.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1A6F-query.scw
PDB file :
Tito_Scwrl_1A6F.pdb
: