Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVKMIVGLGNPGSKYNDTKHNIGFMAVDRIVKDLDVNFTEDKNFKAEIGSDFINGEKIYFIKPTTFMNNSGIAVKALLTYYNISIKDMIIIYDDLDMEVGKIRFRQKGSAGGHNGIKSIIAHLGTQEFDRIKVGIGRPNGRMTVINHVLGKFDKNDEIMILNTLDKVDNAVNYYLQTNDFQKTMQKYNGLK
4QT4 Chain:A ((1-189))
MVKMIVGLGNPGSKYEKTKHNIGFMAIDNIVKNLDVTFTDDKNFKAQIGSTFINHEKVYFVKPTTFMNNSGIAVKALLTYYNIDITDLIVIYDDLDMEVSKLRLRSKGSAGGHNGIKSIIAHIGTQEFNRIKVGIGRPLKGMTVINHVMGQFNTEDNIAISLTLDRVVNAVKFYLQENDFEKTMQKFNG--
General information:
TITO was launched using:
RESULT:
Template:
4QT4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -107324 for 1548 contacts (-69.3/contact) +
2D Compatibility (PS) -20373 + (NN) -8043 + (LL) 240
1D Compatibility (HY) -26800 + (ID) 7400
Total energy: -169700.0 ( -109.63 by residue)
QMean score : 0.573
(partial model without unconserved sides chains):
PDB file :
Tito_4QT4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4QT4-query.scw
PDB file :
Tito_Scwrl_4QT4.pdb
: