Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNLIETIEHFLAYSDDKL-----EELADKNYQL------RQTIVEKEKIESREK
4I6V Chain:A ((94-142))
---LIELCERFFGFQDDRLTPDNWEALYDHSEKLMSAPDWEQTVLQKSQLEAVFL
General information:
TITO was launched using:
RESULT:
Template:
4I6V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8562 for 167 contacts (-51.3/contact) +
2D Compatibility (PS) -4054 + (NN) -2293 + (LL) 48
1D Compatibility (HY) -4400 + (ID) 800
Total energy: -20061.0 ( -120.13 by residue)
QMean score : 0.640
(partial model without unconserved sides chains):
PDB file :
Tito_4I6V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4I6V-query.scw
PDB file :
Tito_Scwrl_4I6V.pdb
: