Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYNTILKDTLSKGLFTAHQKVLIAVSGGIDSINLLQFLYQYQKELSISIGIAHINHGQRK-ESEKEEEYIRQWGQIHDVPVFISYFQ--------GIFSEDRARNHRYNFFSKVMREEGYTALVTAHHADDQAETVFMRILRGSRLRYLSGIKQVSAFANGQLIRPFLPYKKELLPN------IFHFEDASNASSDYLRNRIRNVYFPALERENNQLKDSLITLSEETECLFTALTDLTRSI-----------EVTNCYDFLRQTHSVQEFLLQDYISKFPD---LQVSKEQFRVILKLIRTKA-NIDYTIKSGYFLHKDYESFHITKIHPKTDSFKVEKRLELHN-IQIFSQYLFSYG--KF--I-SQADITIPI---YDTSPIILRRRKEGDRIFLG--NHTKKIRRLFIDEKITLKEREEA-VIGEQNKELIFVIVAGRTYLRKPSEHDIMKGKLYIENLEKR |
3A2K Chain:A ((6-458)) | -----RAFIHRHQLLSEGAAVIVGVSGGPDSLALLHVFLSLRDEWKLQVIAAHVDHMFRGRESEEEMEFVKRFCVERRILCETAQIDVPAFQRSAGLGAQEAARICRYRFFAELMEKHQAGYVAVGHHGDDQVETILMRLVRGSTSKGYAGIPVKRPFHGGYLIRPFLAVSRAEIEAYCRQMGLSPRCDPSNEKDDYTRNRFRHHIVPLLRQENPRLHERFQQYSEMMAEDEQFLEELAADALNKVMEKQHRDAALSIGPFLELPRPLQRRVLQLLLLRLYGGVPPTLTSVHIGHILMLCERGRPSGMIDLPKGLKVIRSYDRCLFTFDAESGEKG-YWFELPVPALLPLPNGYAIISEFGEHYPRKQAGNDWFVVDPASVSLPLRVRTRRRGDRMVLKGTGGTKKLKEIFIEAKIPRMERDRWPIVEDADGRILWVPGLKKSAFEAQNRGQARYILLQYQAM--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3A2K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -167133 for 2938 contacts (-56.9/contact) +
2D Compatibility (PS) -43922 + (NN) -6127 + (LL) 768
1D Compatibility (HY) -22400 + (ID) 4950
Total energy: -243764.0 ( -82.97 by residue)
QMean score : 0.376
|
|
|