Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSIKKSVIGFCLGAAALSMFACVDSSQSVMAAEKDKVEITWWAFPTFTQEKAKDGVGTYEKKVIKAFEKKNPNIKVKLETIDFTSGPEKITTAIEAGTAPDVLFDAPGRIIQYGKNGK-LADLNDLFTDQFIKDVNNKNIIQASKSGDKAYMYPISSAPFYMAFNKKMLKDAGVLKLVKEGWTTSDFEKVLKALKNKGY-TPGSFFANGQGGDQGPRAFFANLYSAPITDKEVTKYTTDTKNSVKSMKKIVEWIKKGYLMNGSQ-YDGS----ADIQNFANGQTAFTILWAPAQPKTQAKLLESSKVDYLEVPFPSEDG-KP-DL-EYLVNGFAVFNNKDENKVKASKKFITFIADDKKWGPKDVIRTGAFPVRTSFGDL------YKG-DKRMMKISKWTQYYSPYYNTIDGF--SEMRTLWFPMVQSVSNGDEKPADALKDFTQKANDTIKKAAK |
| 2UVJ Chain:A ((5-406)) | -----------------------------------EVNLRMSWWGGN--G-----RHQVTLKALEEFHKQHPNINVKAEYTGWDGHLSRLTTQIAGGTEPDVMQTNWNWLPIFSKDGTGFYNLFSVKEQLDLAQFDPKELQQT-TVNGKLNGIPISVTARIFYFNDATWAKAGLE--YPK--TWDELLAAGKVFKEKLGDQYYPVVLEHQDTLALIRSYMTQKYNIPTIDEANKKFAYSPEQWVEFFTMYKTMVDNHVMPSTKYYASFGKSNMYEMKPWINGEWAGTYMWNSTITKYSDN--LTKPAKLVLGPYPMLPGAKDAGLFFKPAQMLSIGK--STKHPQESAMLINFLLNSKEGVEALG-LERGVPLSATAVTQLRASGVIKDEDPSVAGLNMALEL-PHKMTTSPYFDDPQIVSLFGDAIQYIDYGQKTVQETAEYFNKQGDRILKRAMR |
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General information:
TITO was launched using:
| RESULT:
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Template: 2UVJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -44146 for 3228 contacts (-13.7/contact) +
2D Compatibility (PS) -40007 + (NN) -6433 + (LL) 3976
1D Compatibility (HY) -12400 + (ID) 3400
Total energy: -102410.0 ( -31.73 by residue)
QMean score : 0.397
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