Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIQQETRLKVADNSGAREILTIKVLGGSGRKFANIGDVIVASVKQATPGGAVKKGDVVKAVIVRTKTGARRPDGSYIKFDDNAAVIIRDDKTPRGTRIFGPVARELREGGYMKIVSLAPEVL
1WHI Chain:A ((1-122))
MIQQESRLKVADNSGAREVLVIKVLGGSGRRYANIGDVVVATVKDATPGGVVKKGQVVKAVVVRTKRGVRRPDGSYIRFDENACVIIRDDKSPRGTRIFGPVARELRDKDFMKIISLAPEVI
General information:
TITO was launched using:
RESULT:
Template:
1WHI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -70603 for 944 contacts (-74.8/contact) +
2D Compatibility (PS) -13169 + (NN) -5247 + (LL) 0
1D Compatibility (HY) -15200 + (ID) 4950
Total energy: -109169.0 ( -115.65 by residue)
QMean score : 0.659
(partial model without unconserved sides chains):
PDB file :
Tito_1WHI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WHI-query.scw
PDB file :
Tito_Scwrl_1WHI.pdb
: