Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFVKKGDKVRVIAGKDKGTEAVVLKALPKVNKVVVEGVALIKKHQKPNNENPQGAIVEKEAPIHVSNVQVLD-KNGVAGRVGYKVVDGKKVRYNKKSGEVLD
4U67 Chain:R ((14-113))
LHFKKGDTVIVLSGKHKGQTGKVLLALPRDQKVVVEGVNVITKNVKPSMTNPQGGQEQRELALHASKVALVDPETGKATRVRKQIVDGKKVRVAVASGKT--
General information:
TITO was launched using:
RESULT:
Template:
4U67.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 5160 for 586 contacts (8.8/contact) +
2D Compatibility (PS) -10599 + (NN) 1339 + (LL) 100
1D Compatibility (HY) -5600 + (ID) 2400
Total energy: -12000.0 ( -20.48 by residue)
QMean score : 0.391
(partial model without unconserved sides chains):
PDB file :
Tito_4U67.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4U67-query.scw
PDB file :
Tito_Scwrl_4U67.pdb
: