Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MANRLKEKYTNEVVPALTEKFNYSSVMAVPKVEKIVLNMGVGDAVSNAKNLEKAAAELALISGQKPLITKAKKSIAGFRLREGVAIGAKVTLRGERMYEFLDKLVSVSLPRVRDFHGVPTKSFDGRGNYTLGVKEQLIFPEINFDDVDKVRGLDIVIVTTANTDEESRELLKGLGMPFAK
1IQ4 Chain:A ((1-179))
-MNRLKEKYLNEVVPALMSKFNYKSIMQVPKIEKIVINMGVGDAVQNPKALDSAVEELTLIAGQRPVVTRAKKSIAGFRLRQGMPIGAKVTLRGERMYEFLDKLISVSLPRARDFRGVSKKSFDGRGNYTLGIKEQLIFPEIDYDKVNKVRGMDIVIVTTANTDEEARELLALLGMPFQK
General information:
TITO was launched using:
RESULT:
Template:
1IQ4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -82506 for 1345 contacts (-61.3/contact) +
2D Compatibility (PS) -19390 + (NN) -9062 + (LL) 208
1D Compatibility (HY) -24000 + (ID) 6950
Total energy: -141700.0 ( -105.35 by residue)
QMean score : 0.586
(partial model without unconserved sides chains):
PDB file :
Tito_1IQ4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IQ4-query.scw
PDB file :
Tito_Scwrl_1IQ4.pdb
: