Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MISKPDKNKIRQKRHRRVRGKLSGTADRPRLNIFRSNTGIYAQVIDDVAGVTLASASTLDKEV--SNGTKTEQAVVVGKLVAERAVAKGISEVVFDRGGYLYHGRVKALADSARENGLKF
1ILY Chain:A ((22-111))
---------------------------RLRLSVFRSLKHIYAQIIDDEKGVTLVSASSLALK-LKGN--KTEVARQVGRALAEKALALGIKQVAFDRGPYKYHGRVKALAEGAREGGLEF
General information:
TITO was launched using:
RESULT:
Template:
1ILY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28817 for 727 contacts (-39.6/contact) +
2D Compatibility (PS) -9396 + (NN) -3069 + (LL) 1464
1D Compatibility (HY) -6400 + (ID) 2750
Total energy: -48968.0 ( -67.36 by residue)
QMean score : 0.439
(partial model without unconserved sides chains):
PDB file :
Tito_1ILY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ILY-query.scw
PDB file :
Tito_Scwrl_1ILY.pdb
: