Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKVRPSVKPICEYCKVIRRNGRVMVICPTNPK-HKQRQG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
1IHO Chain:A ((1-282)) | MLIIETLPLLRQQIRRLRMEGKRVALVPTMGNLHDGHMKLVDEAKARADVVVVSIFVNPMQFDRPEDLARYPRTLQEDCEKLNKRKVDLVFAPSVKEIYPNGTETHTYVDVPGLSTMLEGASRPGHFRGVSTIVSKLFNLVQPDIACFGEKDFQQLALIRKMVADMGFDIEIVGVPIMRAKDGLALSSRNGYLTAEQRKIAPGLYKVLSSIADKLQAGERDLDEIITIAGQELNEKGFRADDIQIRDADTLLEVSETSKRAVILVAAWLGDARLIDNKMVEL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IHO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 876 for 137 contacts (6.4/contact) +
2D Compatibility (PS) -4241 + (NN) -1496 + (LL) 0
1D Compatibility (HY) -1600 + (ID) 300
Total energy: -6761.0 ( -49.35 by residue)
QMean score : 0.638
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