Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRDFEELFDKVKPIVMKLRRNYFV---QLWEYDDWIQEGRIVLFRLLEEHPYLLDNESKLFIYFKTKFSNYLNDVLRHQDCQKRQFNK------------------------------------------------MPYEEISEV-----SHYVKSKGLVLDD---YIAYRDTLTKVEETLSDIDKEKFEKL-ISGERFAGKKQFIRDIQPFFNAFKAD |
| 1RP3 Chain:A ((9-210)) | -IEREELILKYLPLVKAIATNIKKHLPEDVDIRDLISYGVIGLIKAVDNLST--ENPKRAEAYIKLRIKGAIYDYLRSLDFGSRQVREKERRIKEVVEKLKEKLGREPTDEEVAKELGISTEELFKTLDKINFSYILSLEEVFRDFARDYSELIP-SSTNVEEEVIKRELTEKVKEAVSKLPEREKLVIQLIFYEELPAKEVAKILETSVSRVSQLKAK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RP3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -24165 for 819 contacts (-29.5/contact) +
2D Compatibility (PS) -14804 + (NN) -5000 + (LL) 532
1D Compatibility (HY) -6800 + (ID) 1300
Total energy: -51537.0 ( -62.93 by residue)
QMean score : 0.344
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