Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKNKIIRFSLVGVLLAILCFSLFALLKPNSQQSSSQKLRNEDIKKISSQKRNKKLQLPAVSSKDWNLILVNRDHKHEELSPDVVP------VENIYLDKRITKQATQFLEAARAIDSREHLISGYRSVAYQEKLFNSYVTQEMTSNPNLTRGQAEKLVKTYSQPAGASEHQTGLAMDMSTVDSLNE-----SDPRVVSQLKKIAPQYGFVLRFPDGKTAETGVGYEDWHYRYVGVESAKYMAKHHLTLEEYITLLKENNQ
4MPH Chain:A ((12-192))-----------------------------------------------------------AVVNKEYGLP---EDYKPEDLVVPNVPFSFSGTLEKSYLRKEAAEALERLFDLANKEGIQLNAVSGFRSYDYQKKLY-----------ANNVKR--------FSAKPGHSEHQTGLTMDVSSKSANNELELTFANTKEGKWLKENAHRAGFIIRYPKGKESITGYAYEPWHIRYVG-DIAESIYKKKLTLEEYMNL------


General information:
TITO was launched using:
RESULT:

Template: 4MPH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14190 for 1277 contacts (-11.1/contact) +
2D Compatibility (PS) -17080 + (NN) -6871 + (LL) 6988
1D Compatibility (HY) -9200 + (ID) 3300
Total energy: -43653.0 ( -34.18 by residue)
QMean score : 0.383

(partial model without unconserved sides chains):
PDB file : Tito_4MPH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4MPH-query.scw
PDB file : Tito_Scwrl_4MPH.pdb: