Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKNKIIRFSLVGVLLAILCFSLFALLKPNSQQSSSQKLRNEDIKKISSQKRNKKLQLPAVSSKDWNLILVNRDHKHEELSPDVVP------VENIYLDKRITKQATQFLEAARAIDSREHLISGYRSVAYQEKLFNSYVTQEMTSNPNLTRGQAEKLVKTYSQPAGASEHQTGLAMDMSTVDSLNE-----SDPRVVSQLKKIAPQYGFVLRFPDGKTAETGVGYEDWHYRYVGVESAKYMAKHHLTLEEYITLLKENNQ |
4MPH Chain:A ((12-192)) | -----------------------------------------------------------AVVNKEYGLP---EDYKPEDLVVPNVPFSFSGTLEKSYLRKEAAEALERLFDLANKEGIQLNAVSGFRSYDYQKKLY-----------ANNVKR--------FSAKPGHSEHQTGLTMDVSSKSANNELELTFANTKEGKWLKENAHRAGFIIRYPKGKESITGYAYEPWHIRYVG-DIAESIYKKKLTLEEYMNL------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4MPH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -14190 for 1277 contacts (-11.1/contact) +
2D Compatibility (PS) -17080 + (NN) -6871 + (LL) 6988
1D Compatibility (HY) -9200 + (ID) 3300
Total energy: -43653.0 ( -34.18 by residue)
QMean score : 0.383
|
|
|