Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRKRFSLLNFIVVTFIFFFFILFPLLNHKGKVDANSRQSVTYTKEEFIQKIVPDAQDLGKSYGIRPSFIIAQAALDSDFGEKILANK-YHNLFGLLAEPGTPSITL-----NDSSTGKKQEKQFTHYKSWKYSMYDYLAHIKSGATGKKDSY--TIMVSVKNPKTLVQKLQDSGFDNDKKYAKKMTEIIDLYDLTRYDK
3FI7 Chain:A ((30-183))
-------------------------------------------QQTFINSISTQAMDLCKKYNLYPSVMIAQAALESNWGRSELGKAPNYNLFGIKGSYNGKSVTMKTWEYSDSKGWYQINANFAKYPSHKESLEDNAKKLRNGPSWDSSYYKGAWRENAKTYKDATAWLQGR-YATDNTYASKLNTLISSYNLTQYD-
General information:
TITO was launched using:
RESULT:
Template:
3FI7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -71549 for 1109 contacts (-64.5/contact) +
2D Compatibility (PS) -15416 + (NN) -478 + (LL) 3752
1D Compatibility (HY) -6800 + (ID) 2450
Total energy: -92941.0 ( -83.81 by residue)
QMean score : 0.612
(partial model without unconserved sides chains):
PDB file :
Tito_3FI7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FI7-query.scw
PDB file :
Tito_Scwrl_3FI7.pdb
: