Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTKLRRFRFPLRFYFTLMFVLTMLFSVLASLLLVAAIVFTFFQGVLTTHVLQVSALAVVFLSLVIASISMWYGSYHLTKPILDISRIVSNVADGDFEGHIYRNSNRRKSYEYYNELDELSESINQMIVSLSHMDHMRKDFITNVSHELKTPIAAVANIVELLQDP--ELDEETQSELLGLVKTESLRLTRLCDTMLQMSRVDNQETIGELSSVRVDEQIRQAMISLTERWQAKRINFQLDSK---PYTVYSNSDLLMQVWINLLDNAIKYS-DDIVD--LRVRMEETNNHYLRVIISDKGRGISQYDVQHIFDKFYQADQSHNQQGNGLGLAIVKRIIVLCKGRISVSSQFEIGTEFCVELPLS
4JAU Chain:A ((13-246))---------------------------------------------------------------------------------------------------------------------------------LKRIDRMKTEFIANISHELRTPLTVIKGYAEMIYNSLGELDLSTLKEFLETIIEQSNHLENLLNELLDFSRLERKSLQINREKVDLCDLVESAVNAIKEFASSHNVNVLFESNVPCPVEAYIDPTRIRQVLLNLLNNGVKYSKKDAPDKYVKVILDEKDGGVL-IIVEDNGIGIPDHAKDRIFEQFYRVDS-------GLGLAITKEIVELHGGRIWVESEVGKGSRFFVWIPK-


General information:
TITO was launched using:
RESULT:

Template: 4JAU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -127565 for 1504 contacts (-84.8/contact) +
2D Compatibility (PS) -23406 + (NN) -11126 + (LL) 12304
1D Compatibility (HY) -19600 + (ID) 3700
Total energy: -173093.0 ( -115.09 by residue)
QMean score : 0.537

(partial model without unconserved sides chains):
PDB file : Tito_4JAU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4JAU-query.scw
PDB file : Tito_Scwrl_4JAU.pdb: