Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTKLRRFRFPLRFYFTLMFVLTMLFSVLASLLLVAAIVFTFFQGVLTTHVLQVSALAVVFLSLVIASISMWYGSYHLTKPILDISRIVSNVADGDFEGHIYRNSNRRKSYEYYNELDELSESINQMIVSLSHMDHMRKDFITNVSHELKTPIAAVANIVELLQDP--ELDEETQSELLGLVKTESLRLTRLCDTMLQMSRVDNQETIGELSSVRVDEQIRQAMISLTERWQAKRINFQLDSK---PYTVYSNSDLLMQVWINLLDNAIKYS-DDIVD--LRVRMEETNNHYLRVIISDKGRGISQYDVQHIFDKFYQADQSHNQQGNGLGLAIVKRIIVLCKGRISVSSQFEIGTEFCVELPLS |
4JAU Chain:A ((13-246)) | ---------------------------------------------------------------------------------------------------------------------------------LKRIDRMKTEFIANISHELRTPLTVIKGYAEMIYNSLGELDLSTLKEFLETIIEQSNHLENLLNELLDFSRLERKSLQINREKVDLCDLVESAVNAIKEFASSHNVNVLFESNVPCPVEAYIDPTRIRQVLLNLLNNGVKYSKKDAPDKYVKVILDEKDGGVL-IIVEDNGIGIPDHAKDRIFEQFYRVDS-------GLGLAITKEIVELHGGRIWVESEVGKGSRFFVWIPK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JAU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -127565 for 1504 contacts (-84.8/contact) +
2D Compatibility (PS) -23406 + (NN) -11126 + (LL) 12304
1D Compatibility (HY) -19600 + (ID) 3700
Total energy: -173093.0 ( -115.09 by residue)
QMean score : 0.537
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