Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-----MAKVCYFTGRKTVSGNNRSHAMNQTKRTVKPNLQKVTVLI-DGKPKKVWVSARALKSGKVERV---------
2JZ6 Chain:A ((1-77))
QGHMIMAKRCEVCGKAPRSGNTVSHSDKKSERWFRPNLQKVRVVLPDGTIKRMRVCTSCLKSGKVKKYVGQVSEVGS
General information:
TITO was launched using:
RESULT:
Template:
2JZ6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1218 for 349 contacts (-3.5/contact) +
2D Compatibility (PS) -6717 + (NN) -430 + (LL) 0
1D Compatibility (HY) -3600 + (ID) 1400
Total energy: -13365.0 ( -38.30 by residue)
QMean score : 0.616
(partial model without unconserved sides chains):
PDB file :
Tito_2JZ6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JZ6-query.scw
PDB file :
Tito_Scwrl_2JZ6.pdb
: