Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTVKINTRDGQIELSDDVIATVVGGSATEIFGVVGMASKSAIKDNFQALLRKENYAKGVVVRSSEAGIAVDVYTVMSYGVKISEVSKNIQERVKFNLENQLGLSADMVNVYVQSIKVVGED
1MWW Chain:A ((59-107))
--------------------------------------------------------------------YTVIEINLMAGRM-EGTKKRLIKMLFSELEYKLGIRAHDVEITIKEQPAHCWG
General information:
TITO was launched using:
RESULT:
Template:
1MWW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22673 for 255 contacts (-88.9/contact) +
2D Compatibility (PS) -5489 + (NN) -1461 + (LL) 5032
1D Compatibility (HY) 800 + (ID) 400
Total energy: -24191.0 ( -94.87 by residue)
QMean score : 0.553
(partial model without unconserved sides chains):
PDB file :
Tito_1MWW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1MWW-query.scw
PDB file :
Tito_Scwrl_1MWW.pdb
: