Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKITTSLFQEMVQAASTRLSKQAEYVNSLNVFPVPDGDTGTNMGMTMENGAKEVSDKPATTVGEVGQILSKGVLMGARGNSGVITSQLFRGFGQSIKDKEELTGQDLAHAFQNGVEVAYKAVMKPVEGTILTVSRGAATAALKKAEETDDAVEVMRATLKGAKRALAKTPEMLPVLKEVGVVDSGGQGLVFIYEGFLSALTGEYIASEDFKATPATMTEMVNAEHHKAVVGHVATEDIKYGYCTEVMVGLKQGPTYVKEFNYEEFQGYLSNLGDSLLVVNDDEIVKVHVHTEDPGLVMQEGLKYGSLVKVKVENMRNQHDAQMQKVEVEETVKETKEYGIIAVVAGDGLAEIFKSQGVDY----IISGG---------------------------QTMNPSTEDIVKAIEK-V--NARNVIILPNNKNI---FMAAQSAADVVDIPAAVVETRTV--PQGFTSLLA---FDPAKSLETNVADMTNSLS--DVISGSVTLAVRDTTIDGLEIHEN-----DILGMVDGKILVSTPDME--KALKDTFDKMIDE----DSEIVTIYVGEDGKQALAETLSEYLEETYEDVEVEIHQGDQPVYPYLMSVE |
| 1MGP Chain:A ((25-292)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HMKVKILVDSTADVPFSWMEKYDIDSIPLYVVWEDGRSEPDEREPEEIMNFYKRIREAGSVPKTSQPSVEDFKKRYLKYKEEDYDVVLVLTLSSKLSGTYNSAVLASKEVDIPVYVVDTLLASGAIPLPARVAREMLENGATIEEVLKKLDERMKNKDFKA-IFYVSNFDYLVKGGRV---LLKIRVCLHIENGELIPYRKVRGDKKAIEALIEKLREDTPEGSKLRVIGVHADNE--AGVVELLNTLRKSYEVVDEIISPMGKVITTHVGPGT |
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General information:
TITO was launched using:
| RESULT:
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Template: 1MGP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -59355 for 1508 contacts (-39.4/contact) +
2D Compatibility (PS) -22852 + (NN) -10661 + (LL) 23204
1D Compatibility (HY) -9200 + (ID) 1950
Total energy: -80814.0 ( -53.59 by residue)
QMean score : 0.403
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