Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKQKNNWRRVGVGVLTLASVATLAACGSKSASQDSNGAINWAIP--------TEINTLDLSKVTDTYSNLAIGNSSSNFLRLDKDGKTRPDLAT-KVDVSKDGLTYTATLRKGLKWSDGSKLTAKDFVYSWQRLVDPKTASQYAYLAVEGHVLNADKINEG-QEKDLNKLGVKAEGDDKVVITLSSPSPQFIYYLAFTNFMPQKQEVVEKYGKDYATTSKNTVYSGPYTVEGWN--GSNGTFTLKKNKNYWDAKNVKTKEVRIQTVKKPDTAVQMYKRGELDAANISNTSAIYQANKNNKDVTDVLEATTAYMQYNTTGSVKGLDNVKIRRALNLATNRKGVVQAAVDTGSKPAIAFAPTGLAKTP-DGTDLA--KYVAPGYEYNKTEAAKLFKEGLAESGLTK---LKLTITADADVPAAKNSVDYIKSTWEAALPGLTVEEKFVTFKQRLEDSRKQNFDIVVSVWGGDYPEGSTFYGLFKSDSQNNDGKFANKDYDAAYNKAISEDALKPEESAK--DYKEAEKILFEQGAYNPLYFRSGKGLQNPKLKGVIRNTTGLSIDFTHAYKK |
| 4FAJ Chain:A ((58-557)) | -------------------------------------------VEQVATLTAGTPVQSLDPATAVDQTSITLLANVMEGLYRLDEKNQPQPAIAAGQPKVSNNGKTYTIVIRDGAKWSDGTQITASDFVAAWQRVVDPKTVSPNVELF--SAIKNAKEIASGKQAKD--TLAVKSIGEKTLEIELVEPTPYFTDLLSLTAYYPVQQKAIKEYGKDYGVSQKAIVTNGAFNLTNLEGVGTSDKWTISKNKEYWDQKDVSMDKINFQVVKEINTGINLYNDGQLDEAPLAGEYA--KQYKKDKEYSTTLMANTMFLEMNQTGENKLLQNKNVRKAINYAIDRESLVKKLLDNGSVASVGVVPKEMAFNPVNKKDFANEKLV----EFNKKQAEEYWDKAKKEIDLSKNTSLDLLVS---DGEFEKKAGEFLQGQLQDSLEGLKVTVTPIPANVFMERLTKKDFTLSLSGWQADYADPISFLANFETNSPMNHGGYSNKNYD---------ELLKDSSSKRWQELKKAEKLLINDMGVVPIFQVGTAKLEKSKIKNVLMHSIGAKYDYKKMRIE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FAJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -42231 for 4038 contacts (-10.5/contact) +
2D Compatibility (PS) -52383 + (NN) -24209 + (LL) 4352
1D Compatibility (HY) -32000 + (ID) 8000
Total energy: -154471.0 ( -38.25 by residue)
QMean score : 0.507
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