Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIKYILKRVAILLVTLWVVITLSFFLMQILPGTPYNNPKLTEEMIALLNKQYGLDKPVWQQYLTYLWNVLHGDFGTSYQSVNQPVSRMISLRLGVSVHLGVQALVFGVLGGILVGAISARHK------NDKVDGILSVIATLGISMPSFIIGILLLDYFGFKWNLLPLSGWGTFSQTILPSLALGLPTLASVSRFFRSEMIETLNSDYVQLARSKGMTIRQVTRKHAYRNSMIPILTLIGPLAAGLLTGSALIEQIFSIPGIGQQFVTSIPTKD-YPVIMGTTIVYAVMLMVAILITDVVISIVDPRVRLQ |
3TUI Chain:A ((2-216)) | ---------------------------------------------------------------------------------SEPMMWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTRPGQIIANAKLYRTVSAIVNIFRSIPFIILLVWMIPFTRVIVG--------TSIGLQAAIVPLTVGAAPFIARMVENALLEI-PTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGYSAMGG-AVGAGGLGQIGYQYGYIGYNATVMNTVLVLLVILVYLIQFAGDRIVRAVTR----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TUI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -142107 for 1624 contacts (-87.5/contact) +
2D Compatibility (PS) -21380 + (NN) -2574 + (LL) 8296
1D Compatibility (HY) -13600 + (ID) 1600
Total energy: -172965.0 ( -106.51 by residue)
QMean score : 0.354
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