Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTVLEQKLDHLVSQILLKAENQHELLFGTCQSDVKLTNTQEHILMLLSQEQLTNSDLAKKLNISQAAVTKAVKSLISQDMLKANKDSKDARITYFELSELAKPIADEHTHHHDNTLGVYGRLVNHFSKDEKVVLERFLDLFSRELEG
3TGN Chain:A ((1-145))
MRQLAKDINAFLNEVILQAENQHEILIGHCTSEVALTNTQEHILMLLSEESLTNSELARRLNVSQAAVTKAIKSLVKEGMLET----------FYQLTDLARPIAEEHHHHHEHTLLTYEQVATQFTPNEQKVIQRFLTALVGEI--
General information:
TITO was launched using:
RESULT:
Template:
3TGN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52753 for 854 contacts (-61.8/contact) +
2D Compatibility (PS) -13830 + (NN) -5117 + (LL) 300
1D Compatibility (HY) -15600 + (ID) 3500
Total energy: -90500.0 ( -105.97 by residue)
QMean score : 0.585
(partial model without unconserved sides chains):
PDB file :
Tito_3TGN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TGN-query.scw
PDB file :
Tito_Scwrl_3TGN.pdb
: