Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSFIIRKGKILALLIAFLVINQLVPILAVWLLKNHYQTPFTSILLIGLELLIIALFLYYAKVKQIIRWKALLTRKALVTIFLGWLSLRVPQIIGYLIMTMQGVKDTANQTVIMELTKQLPLALMLIFTIIGAPIMEEIIFRYIIPKELFAKHQKWGFVIGTLAFALIHSPSDIGSFIIYAGMGAILSFVYYKTEHLEYSIMVHFINNALAYSVLISTMMNN |
| 3W5A Chain:C ((1-31)) | -----MERSTRELCLNFTVV--LITVILIWLLVRSYQY--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3W5A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -14993 for 117 contacts (-128.1/contact) +
2D Compatibility (PS) -3467 + (NN) -4546 + (LL) 19284
1D Compatibility (HY) -4800 + (ID) 450
Total energy: -8972.0 ( -76.68 by residue)
QMean score : 0.088
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