Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNKKILFGTGLAGVGLLAAAGYTLTKKVTDYKRQQITQTLREFFSQMGDIQVFYFNEFESDIKMTSGGLVLEDGRIFEFIYRQGVLDYVEVSK
3MIX Chain:A ((641-675))
---------------------------------RMYVKQLLERYFP---DLPVLSYNELEANVEVQSIGVV-----------------------
General information:
TITO was launched using:
RESULT:
Template:
3MIX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11325 for 130 contacts (-87.1/contact) +
2D Compatibility (PS) -3753 + (NN) -25 + (LL) 4256
1D Compatibility (HY) -4800 + (ID) 600
Total energy: -16247.0 ( -124.98 by residue)
QMean score : 0.022
(partial model without unconserved sides chains):
PDB file :
Tito_3MIX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MIX-query.scw
PDB file :
Tito_Scwrl_3MIX.pdb
: