Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIFTYNREHVGDTLMVIVKDSQGAKLDVDRRGQVARVYLQDSKETVAWNIFEVSSLIVIEGAGQITLSDQDIKILNAELLKEGFEDSLVNNIEPTFVVAQIKEMIDHPDSDHLHICQVEINDGKTVQIVCGAPNASVGLKTVAALPGAMMPNGSLIFPGKLRGEDSFGMLCSARELALPNAPQVRGIIELSDQVIVGESFDANKHWKN
3BU2 Chain:A ((5-196))
----YNKEAVGDVAFLQINPTEG-EYNYVTQGDV--VEIQNDGEVVGYNIFNASNKATLT---HIKLTETLVQAFQKAIEAAGFTYKLDADFTPKFVVGYVETKDKHPDADKLSVLSVDVATEK-LQIVCGAPNVEAGQKVVVAKVGAVMPSGMVIKDAELRGVASSGMICSMKELGLPNAPQEKGIMVLSDDYTVGQSFFE------
General information:
TITO was launched using:
RESULT:
Template:
3BU2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -65905 for 1224 contacts (-53.8/contact) +
2D Compatibility (PS) -19659 + (NN) -7686 + (LL) 988
1D Compatibility (HY) -4800 + (ID) 2500
Total energy: -99562.0 ( -81.34 by residue)
QMean score : 0.244
(partial model without unconserved sides chains):
PDB file :
Tito_3BU2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BU2-query.scw
PDB file :
Tito_Scwrl_3BU2.pdb
: