Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNVTSYKEMLAKPWGKIQYEITFAQLSHI--KNQNVLDFGAGFCLTAQHLAKE-NNVTAIEPNPKLLYDNQSDNIYK-ILGSYEALRDLPNQSFDTIICH-NVLEYIDKHNHPAYFDEFSRLLKPNGELSLIKHNITGKILQSVIFSNDTSTAMELLTGEANFKSA--SFDQGNIYTLEELKQNTNLLVERYQGIRTFYSLQPNHFKTETGWLNKMLAIELSVADKAPYKDIAFLQHITLKKSL |
| 2AVN Chain:A ((26-258)) | ----RAYDSMYETPKWKLYHRLIGSFLEEYLKNPCRVLDLGGGTGKWSLFLQERGFEVVLVDPSKEMLEVAREKGVKNVVEAKAEDLP-FPSGAFEAVLALGDVLSYVE--NKDKAFSEIRRVLVPDGLLIATVDNFYTFLQQ-MIEKDAWDQITRFLKTQTTSVGTTLFSFNSYAFKPEDLDSLEGFETVDIRGIGVME-YPD--ERISE-REETIFRLEQELSRDRNIIWKADHIFFVLKKKR |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2AVN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -62581 for 1754 contacts (-35.7/contact) +
2D Compatibility (PS) -23164 + (NN) 2234 + (LL) 140
1D Compatibility (HY) -7600 + (ID) 2100
Total energy: -93071.0 ( -53.06 by residue)
QMean score : 0.250
|
|
|