Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MLMVLLFQRLGIIMILAFLLVNNSYFRQLIEERSKRETVVLVIIFGLFVIISNITGIEIKGDRSLVERPFLTTISHSDS--LANTRTLVITTASLVGGPLVGSIVGF-IGGVHR---------FFQGSFSGSFYIVSSVLVGIVSGKIGDKLKENHLYPSTSQVILISIIAESIQMLFVGIFTGWELVKMIVIPMM--ILNSLGSTLFLAILKTYLSNESQLRAVQTRDVLELTRQTLPYLRQGLTPQSARSVCEIIKRHTNFDAVGLTDRSNVLAHIGVGHDHHIAGQPVKTDLSKSVIFDGEPRIAQDKAAISCPDHNCQLNSAIVVPLKINDKTVGALKMYFAGDKTMSEVEENLVLGLAQIFSGQLAMGITEEQNKLASMAEIKALQAQINPHFFFNAINTISALIRIDSDKARYALMQLSTFFRTSLQGGQDREVTLEQEKSHVDAYMNVEKLRFP-DKYQLSYDISAPEKMKLPPFGLQVLVENAVRHAFKERKTDNHILVQIKPDGH-YYCVSVSDNGQGISDTIIDKLGQETVAESKGTGTALVNLNNRLNLLYGSVSCLHFSSDKNGTKVW-YRIPNRIREDEHENFNS |
| 5C8T Chain:B ((2-526)) | AENVTGLFKDCS--KIITGLHPTQAPTHLSVDIKFKTE--------GLCVDIPGIP-------KDMTYRRLISMMGFKMNYQVNGYPNMFITREEAIRH--VRAWIGFDVEGCHATRDAVGTNLPLQLGFSTGVNLVA-VPTGYVDTENNTEFTRVNAKPPPG-----DQFKHLIPLMYKGL--PWNVVRIKIVQMLSDTLKGLSDRVVFVLWA-----------------HGFELTSMKYFVK---IGPERTCCLCDKRATCFST---SSDTYACWNHSVGFD--YVYNPFMIDVQQWGFTGNLQSNHDQHCQVHGNAHVASCDAIMTRCLAVHECFVKRVDWSVEYPIIGDELRVNSACRKVQHMVVKSAL-LADKFPVLHDIGNPKAIKCVPQAEVEWKFYDAQPC-----SDKAY----KIEELFYS-------YATHHDKFTDGVCLFWNCNVDRYPANAIVCRFDTRVLSNLNLPGCDGGSLYVN--KHAFHTPAFDKSAFTNLKQLPFFYYSDSPCEYVPLKSATCITRCNLGG-AVCRHHANEYRQYLDAYNMMISA-----------GFSLWIYKQFDT--YNLWNTFTR |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 5C8T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -79425 for 3750 contacts (-21.2/contact) +
2D Compatibility (PS) -50003 + (NN) 10770 + (LL) 7024
1D Compatibility (HY) -26000 + (ID) 4350
Total energy: -141984.0 ( -37.86 by residue)
QMean score : 0.104
|
|
|