Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKHTSKETKTKEAPMFIQMSIYAAILLVSQMISMLLPKSLPIPTTVIGLVLMYVLLTAKIIKVEWVDSFGALMISMIGFMFVPSGISVAANLDILKAEGLQLVAVITISTVVMLVVVAYVARLILAIRELSV-TDLFKKILPNHYSKKVEEK |
3D6Y Chain:A ((240-267)) | ----------------------------------------------------------------------------------------------------------------------------IADRQLTVVSDVYELIIPIHYSPKKQEE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3D6Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1658 for 80 contacts (20.7/contact) +
2D Compatibility (PS) -2556 + (NN) 2415 + (LL) 13348
1D Compatibility (HY) -2400 + (ID) 600
Total energy: 11865.0 ( 148.31 by residue)
QMean score : 0.203
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