Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTSPEERYSSLRRFATEIRLNTLETLNHLGFGHYGGSLSIVETLAILYGDIMDINPEKFKESDRNYMVLSKGHAGPALYSTLYLKGFF--DKTFLHSLNTNGTKLPSHPDRNLTPGIDVTTGSLGQGISIATGIAYAQKIEN----------SSYYTYTIVGDGELNEGQCWEAIQFAAHHQLHHLIVFVDDNKKQLDGLTADICNPGDFVAKFEAFGFDAVRV-KGDD-IEAIDKAIKT-FQ-DSNSVKPKCIVLDSIKGQGVKELEELASNHHLRPDLQQKTMLERAVISLRESLEVVE |
| 1ITZ Chain:A ((11-290)) | -----ATGELLEKSVNTIRFLAIDAVEKANSGHPGLPMGCAPMGHVLYDEVMRYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSVKEEDLKQFRQWGSRTPGHPENFETPGVEVTTGPLGQGIANAVGLALAEKHLAARFNKPDSEIVDHYTYVILGDGCQMEGIANEACSLAGHWGLGKLIAFYDDNHISIDGDTEIAF-TEDVSTRFEALGWHTIWVKNGNTGYDDIRAAIKEAKAVT---DKPTLIKVTTTIGFGSPNKANSYSVHGSALGA---KEVEATRQNLGWPYDTFF |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1ITZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -92290 for 2319 contacts (-39.8/contact) +
2D Compatibility (PS) -29037 + (NN) -14478 + (LL) 284
1D Compatibility (HY) -6800 + (ID) 4250
Total energy: -146571.0 ( -63.20 by residue)
QMean score : 0.529
|
|
|