Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTSTNELDIRLRAFINAPDNFLDSIGLVNALHHSTVWASKEPYAIQVDGQEVVPVFTDITDLNHFKEEQESARDMFWESRRSLDV-LDEAISHGLSGLVYNLKKEGDFGNSTIFYCEDMVQFMNNYTTILNQLLNEDNIVADIMDKTYLVPAFVHPREEGSFDRFFPTMSTPEGKSYVPVFSNLLSFEKWYNHNDFGGAFRKAQGVILAWTIDDIYKPRNGENEIDDTFGVAINPFDEQQVLVDWSDVEND |
| 3KN8 Chain:A ((1-78)) | ---------------------------------------------------------DITVYNGQHKEAATAVAKAFEQETGIKVTLNSGKSEQLAG---QLKEEGDKTPADVFYTEQTATFAD---------LSEAGLLAPISEQTIQQTAQKGVPLAPKKDWIALSGRSRVVVYDHTKLSEKDMEKSVLDYATPKWKGKIGYVSTSGAFLEQVVALSKMKGDKVALNWLKGLKENGKLYAKNSVALQAV |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KN8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3923 for 467 contacts (-8.4/contact) +
2D Compatibility (PS) -8392 + (NN) -5283 + (LL) 5204
1D Compatibility (HY) -2400 + (ID) 1300
Total energy: -16094.0 ( -34.46 by residue)
QMean score : 0.174
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