Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKHSILLVDGYNMIAFWKDTRQLFKSNRLEEAREVLLRKLNHYAHFEHI-DIICVFDAQYVPG------VR---Q---------------RY--DQYKISVIFTEEDETADSYIERAAAELNQSVLNLVSVATSDLNEQWTIFSQGTLRVSARELEQRVATVKSDLDKMSSQIDLSTPKLRPWNDEQLGKLKDFLDGM |
| 3ZDB Chain:A ((2-134)) | --AVHLLIVDALNLIRRIHAV--Q---G-SP-CVETCQHALDQLIMHSQPTHAVAVFDD--SSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWST-SGNEADDLAATLAVKVTQ-AGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZDB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -56070 for 679 contacts (-82.6/contact) +
2D Compatibility (PS) -11217 + (NN) -5800 + (LL) 1152
1D Compatibility (HY) 0 + (ID) 950
Total energy: -72885.0 ( -107.34 by residue)
QMean score : 0.560
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