Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNTLIVNSHPDFSNPYSFTTILQEKFIELYNEHFPNHQ-LSILNLYDCVLPEITKEVLLSIWSKQRKGLELTADEIVQAKISKDLLEQFKSHHRIVFVSPMHNYNVTARAKTYIDNIFIAGETFKYTENGSVGLMTDDYRLLMLESAGSIYSKGQ-YSPYEFPVHYLKAIFKDFMAFDDFCVVRAEGTDILDRQVVLDKMNQDLREAFEAFYSKE
3U7I Chain:A ((7-216))
--TLIINAHPKVDDTSSVSIKVFKHFLESYKELISNNETIEQINLYDDVVPMIDKTVL-SAWEKQGNGQELTREEQKVTERMSEILQQFKSANTYVIVLPLHNFNIPSKLKDYMDNIMIARETFKYTETGSVGLLKDGRRMLVIQASGGIYTNDDWYTDVEYSHKYLKAMF-NFLGIEDYQIVRAQGTAVLDPTEVLQNAYKEVEEAASRLANKY
General information:
TITO was launched using:
RESULT:
Template:
3U7I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -130345 for 1598 contacts (-81.6/contact) +
2D Compatibility (PS) -22817 + (NN) -11936 + (LL) 368
1D Compatibility (HY) -19600 + (ID) 4400
Total energy: -188730.0 ( -118.10 by residue)
QMean score : 0.602
(partial model without unconserved sides chains):
PDB file :
Tito_3U7I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3U7I-query.scw
PDB file :
Tito_Scwrl_3U7I.pdb
: