Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNWSRIWELVKINILYSNPQTLSALRKKQEKHPKKEFSAYKSMFRNQLFQILLFSIIYVFLFVSLDFKEYPGYFTFYIGIFTLVSIIYSFIAMYSVFYESDDVKQYAYLPIKSEELYVAKIFATFGMSVTFLMPILTLMIVAYWRIIGGPLAVLLAIINFAILFLSVTVISLYINSLIGRAIIRSANRKLISTILISLATFGAIVPLLFVNMTSQKMVQGKLQDIAPIPYVRGYYDIVT--APFSMESLLNYYLPLLIILFLIGAIYKWVMPRYYQELLYGQVKQRKVHRQIDFSKRESINKTLVKHHLSSLQNATLLTNTFLMPLLYLAMFIVPILNNGKEIGRFFNENYFGIAFLAGILIGSLCVMPASIVGVGISLEKSNFYFIKSLPISFSYFLKHKFVTLITLQLAVPTFIYFLVGFFLLKLSILVLLSFILGLVFMGLIEGQFIYRRDYKHLFLNWQEVTQLFNRGVGQWLLVGSLFGMMIIGSFLIGISIFWSMVWNTVAVNIIILITGLLILSICQYLLLKNFWKKLV
2YCY Chain:A ((167-253))----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCDFVTNRAYAIASSIISFYIPLLIMIF--------VALRVYRE---AKEQIR--DRA---SKRKRV--MLMREH-KALKTLGIIMGVF--TLCWLPFFLVNIVNVFNRDLVPDWLFVAFNWLGYANSAMNPIIYCRSPDFRKAFKRLLAF--------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2YCY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22912 for 404 contacts (-56.7/contact) +
2D Compatibility (PS) -8506 + (NN) -2750 + (LL) 37524
1D Compatibility (HY) -12400 + (ID) 1550
Total energy: -10594.0 ( -26.22 by residue)
QMean score : 0.303

(partial model without unconserved sides chains):
PDB file : Tito_2YCY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2YCY-query.scw
PDB file : Tito_Scwrl_2YCY.pdb: