Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEISLLTDIGQRRSNNQDFINQFENKAGVPLIILADGMGGHRAGNIASEMTVTDLGSDWAETDFSELSEIRDWMLVSIETENRKIYELGQSDDYKGMGTTIEAVAIVGDNIIFAHVGDSRIGIVRQGEYHLLTSDHSLVNELVKAGQLTEEEAASHPQKNIITQSIGQANPVEPDLGVHLLEEGDYLVVNSDGLTNMLSNADIATVLTQEKTLDDKNQDLITLANHRGGLDNITVALVYVESEAV
2PK0 Chain:B ((6-247))
MEISLLTDIGQRRSNNQDFINQFENKAGVPLIILADGMGGHRAGNIASEMTVTDLGSDWAETDFSELSEIRDWMLVSIETENRKIYELGQSDDYKGMGTTIEAVAIVGDNIIFAHVGDSRIGIVRQGEYHLLTSDHSLVNELVKAGQLTEEEAASHPQKNIITQSIGQANPVEPDLGVHLLEEGDYLVVNSDGLTNMLSNADIATVLTQEKTLDDKNQDLITLANHRGGLDNITVALVYVES---
General information:
TITO was launched using:
RESULT:
Template:
2PK0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -120333 for 2059 contacts (-58.4/contact) +
2D Compatibility (PS) -25973 + (NN) -8180 + (LL) 440
1D Compatibility (HY) -32000 + (ID) 12100
Total energy: -198146.0 ( -96.23 by residue)
QMean score : 0.537
(partial model without unconserved sides chains):
PDB file :
Tito_2PK0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2PK0-query.scw
PDB file :
Tito_Scwrl_2PK0.pdb
: