Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKIWKKITLMFSAIILTTVIALGVYVASAYNFSTNELSKTFKDFKLAKSKSHAIEETKPFSILLMGVDTGSEHRKSKWSGNSDSMILVTINPKTNKTTMTSLERDVLIKLSGPKNNGQTGVEAKLNAAYASGGAEMALMTVQDLLDINVDYFMQINMQGLVDLVNAVGGITVTNKF-DFPISIAANEPEYKAVVEPGTHKINGEQALVYSRMRYDDPEGDYGRQKRQREVIQKVLKKILALNSISSYKKILSAVSNNMQTNI------EISSKTIPNLLAYKDSLEHIKSYQLKGEDATLSDGGSYQILTKKHLLAVQNRIKKELDKKRSKTLKTSAILYEDYYGTTASNDSSTYSSTQENNYNTTPYSEAPPSYSGNTTYSSETNQTTHQNYYNSSTPASNYSSNTNTGQADSSGSVNNHNGAATPNPNTGTQPVPGQTNP |
3QFI Chain:A ((53-303)) | --------------------------------------------------TANIDAQEPFSVLLMGIDTGD-----------DTTMVVTINPKENKSTMISLDRDILTDIVG--NDTQD----KLNHAYAFGGAEMAINTVQELLDIPIHHYVSINMKGLKDLIDAVGGIEVDNTIGEFT----------GITVPAGKIKLDGTTGLAYARMRHEDPEGDVGRQRRQREVVEKIVRKVMSFD----YRKILDAVEANVKTDLTWDDMMDIQSK-------YLSAFKTIDSEQLQGYSATIDD-IYYQVLDPNSLYKTQTTLRKQLGLKEHASEREKDLAFYNQFSYAVTD-------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QFI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -92872 for 1752 contacts (-53.0/contact) +
2D Compatibility (PS) -24901 + (NN) -10135 + (LL) 7848
1D Compatibility (HY) -23600 + (ID) 5750
Total energy: -149410.0 ( -85.28 by residue)
QMean score : 0.455
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