Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRRKSMTTTFKIIRGYYLTGVGQEPSAYYFKIRDDFPEFETLKSGDVALTFYQNGEAITSLPALIRIDGVIEAEKQVLEFLQSEKKDHLPMLPLVALYEQFDPLQFNTVME-VFDNLKAEIKRL----AKVNYVQGDLFDFMQEGEG
2NML Chain:A ((25-63))
---------------------------------------------------------------------------------------------------------VNECMEGVCKMYEEHLKRMNPNSPSITYDISQLFDFIDDLAD
General information:
TITO was launched using:
RESULT:
Template:
2NML.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7727 for 147 contacts (-52.6/contact) +
2D Compatibility (PS) -3615 + (NN) -1087 + (LL) 7928
1D Compatibility (HY) -5200 + (ID) 550
Total energy: -10251.0 ( -69.73 by residue)
QMean score : 0.677
(partial model without unconserved sides chains):
PDB file :
Tito_2NML.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2NML-query.scw
PDB file :
Tito_Scwrl_2NML.pdb
: