Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
------------MAKKDLTKIDRDLEEAKKKVADL---ENEKRQAEEN----LQKQIGKLYVQIQLKKDKSQSYETI-------LDDLKTELELIKQEEKARREEAKNRQLTSSDEH-
4OYD Chain:B ((1-117))
ADPKKVLDKAKDQAENRVRELKQKLEELYKEARKLDLTQEMRRKLELRYIAAMLMAIGDIYNAIRQAKQEADKLKKAGLVNSQQLDELKRRLEELK-EEASRKARDYGREFQLKLEYG
General information:
TITO was launched using:
RESULT:
Template:
4OYD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 38301 for 515 contacts (74.4/contact) +
2D Compatibility (PS) -10232 + (NN) -9120 + (LL) 120
1D Compatibility (HY) -3600 + (ID) 1250
Total energy: 14219.0 ( 27.61 by residue)
QMean score : 0.427
(partial model without unconserved sides chains):
PDB file :
Tito_4OYD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4OYD-query.scw
PDB file :
Tito_Scwrl_4OYD.pdb
: