Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAIKQTQIKSSEKRSLGRKQDKKKGNQEYFDLHSCVELLDVKAIIDNRQAYIQLVDYGYLQLMEIPGKDLGSLSYNEIRRTIDNFEKWLTDFNTDIQIETTTLPTNTDTQIMDLRHHLSLVRQEMAKLLPDSRRYMQLHDRELLLRNDIQVEESIQQEIYNTEFILWLFAPTTTELDELVRKAKSYGNNDFVPQEITKVKKEQIIKQFNNMNEKV |
| 1GKU Chain:B ((750-837)) | -----------------------------------------------------------------------------------------------------------DEEEFDLTIKLVEEREELRTPLPPYTTETMLSDANRILKFSVKQTMQIAQELFENGLITYHRTDSTRVSDVGQRIAKEYLGDDFVGREWGESGAHECIRPTRPLTRDD |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GKU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 10828 for 423 contacts (25.6/contact) +
2D Compatibility (PS) -9480 + (NN) -5072 + (LL) 7336
1D Compatibility (HY) -1600 + (ID) 1250
Total energy: 762.0 ( 1.80 by residue)
QMean score : 0.129
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