Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIIFVSLKKFVQTFWWLIAAIALYVFYQSIGLNMFFLLIIGLLALKFVPALVLPILFIALGVYFSGGFSFMADLIILFFWGLVSLPICFAFAESVRTSIERKR
1P49 Chain:A ((171-213))
------------------------------------LQIVGVTLLTLAALNCLGLLHVPLGVFFS--LLFLAALILTLFLGFLHYFRPLNCFMMRNYEIIQQP
General information:
TITO was launched using:
RESULT:
Template:
1P49.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28362 for 210 contacts (-135.1/contact) +
2D Compatibility (PS) -4402 + (NN) -1035 + (LL) 4204
1D Compatibility (HY) -4000 + (ID) 350
Total energy: -33945.0 ( -161.64 by residue)
QMean score : 0.162
(partial model without unconserved sides chains):
PDB file :
Tito_1P49.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1P49-query.scw
PDB file :
Tito_Scwrl_1P49.pdb
: