Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKTKKIPLRKSVVSGEVIDKRDLLRIVKNKEGQVFIDPTGKQNGRGAYIKLDNDEAILAKKKRVFDRSFSMEVSDEFYDELLAYVDHKVKRRELGLE
1G2R Chain:A ((7-100))
----RKIPLRKSVVSNEVIDKRDLLRIVKNKEGQVFIDPTGKANGRGAYIKLDNAEALEAKKKKVFNRSFSMEVEESFYDELIAYVDHKVKRRELGLE
General information:
TITO was launched using:
RESULT:
Template:
1G2R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30413 for 631 contacts (-48.2/contact) +
2D Compatibility (PS) -9953 + (NN) -4483 + (LL) 468
1D Compatibility (HY) -12000 + (ID) 4100
Total energy: -60481.0 ( -95.85 by residue)
QMean score : 0.710
(partial model without unconserved sides chains):
PDB file :
Tito_1G2R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1G2R-query.scw
PDB file :
Tito_Scwrl_1G2R.pdb
: