Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVYHFQNPSDFMLKNYLTKAKTIAVVGLSDRQETAAYQVSKIMQEAGYQIIPVNPKNAGQKILGQMTYASLKDVTEHIDIVNIFRRSEYLPDIAREFLEVDADIFWAQLGLESQEAETILKQAGHKQIVMNKCLKVECQKLHSETN
1IUK Chain:A ((3-136))
---------DQELRAYLSQAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQGEELFGEEAVASLLDLKEPVDILDVFRPPSALMDHLPEVLALRPGLVWLQSGIRHPEFEKALKEAGI-PVVADRCLMVEHKRLFRG--
General information:
TITO was launched using:
RESULT:
Template:
1IUK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101666 for 1066 contacts (-95.4/contact) +
2D Compatibility (PS) -14958 + (NN) -7742 + (LL) 576
1D Compatibility (HY) -10800 + (ID) 2500
Total energy: -137090.0 ( -128.60 by residue)
QMean score : 0.635
(partial model without unconserved sides chains):
PDB file :
Tito_1IUK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IUK-query.scw
PDB file :
Tito_Scwrl_1IUK.pdb
: