Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLKYYIVIGYLISMLITVAGVFFGLNHMLIETRGVYYILSVTIIACIVGGIVNLFLLSSVFTSLKKLKQKMKDISQRCFDTKAQICSPQEFKDLETAFNQMSSELESTFKSLNESEREKTMMIAQLSHDIKTPITSIQSTVEGILDGIISEEEVNY-YLNTISRQTNRLNHLVEELSFITLETMSDTAEPHKEETIYLDKLLIDILSEFQLVFEKE-NRQVMIDVAPDVSK----LSSQYDKLSRILLNLISNAVKYSDPGSPLTIKAYSNRQDIVIDIIDQGYGIKDEDLASIFNRLYRVESSRNMKTGGHGLGLYIARQLAHQLNGDILVESQYQKGSKFSLVLKLQK |
| 4U7O Chain:A ((32-263)) | --------------------------------------------------------------------------------------------------------------------DNDRKQFVSNVSHELRTPLTSLRSYIEALSDGAWKDPEVAPGFLKVTQEETDRMIRMINEL--LSLSRMDSGTTRVDMELVNINEMFNYVLDRFDMILKKDDNPAKYYTIKREFTKRDLWVEIDTDKFTQVLDNIMNNAIKYSPDGGVVTCRLLETHNQVIISISDQGLGIPRADLGHVFDRFFRVDK-----QGGTGLGLAISKEVVQMLGGRIWVDSVEGKGSTFYISLPYE- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4U7O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -111268 for 1530 contacts (-72.7/contact) +
2D Compatibility (PS) -23305 + (NN) -2905 + (LL) 10596
1D Compatibility (HY) -21600 + (ID) 3300
Total energy: -151782.0 ( -99.20 by residue)
QMean score : 0.565
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