Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQKFTQEEKEWFMTEALKEAKSSLEKEEIPIGCVIVKDGHIIGRGHNAREEFNKAILHAEIMAINNANEKVGNWRLLDTTLFVTVEPCVMCSGAIGLARIPHVIYGAKNTKFGAAGSLYDILSDSRLNHRVEVETGILEDQCAKIMQDFFRKGRQRKKEAKLSEKTKI
2NX8 Chain:A ((8-168))
LMPYSLEEQTYFMQEALKESEKSLQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAINEANAHEGNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGVDSLYQILTDERLNHRVQVERGLLAADCANIMQTFFRQGRERKKIAKHLIKE--
General information:
TITO was launched using:
RESULT:
Template:
2NX8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -91074 for 1393 contacts (-65.4/contact) +
2D Compatibility (PS) -17354 + (NN) -6031 + (LL) 148
1D Compatibility (HY) -20000 + (ID) 5850
Total energy: -140161.0 ( -100.62 by residue)
QMean score : 0.562
(partial model without unconserved sides chains):
PDB file :
Tito_2NX8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2NX8-query.scw
PDB file :
Tito_Scwrl_2NX8.pdb
: