Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSYIEKIEANKVLDLKQIVPIEEEQMLSKTLVQRKDLGMTVFSLDKGQEIGRHSSPGDAMVNILSGLAQITIDQDKFDVAAGECIVMPANIPHSLYAKEAFQMLLVVVKPEV
2OZJ Chain:A ((12-109))
----------RPLPLASLIEARENQVLSMALAQSDRVQISLFSFADGESVSEEEYFGDTLYLILQGEAVITFDDQKIDLVPEDVLMVPAHKIHAIAGKGRFKMLQITLID--
General information:
TITO was launched using:
RESULT:
Template:
2OZJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64263 for 653 contacts (-98.4/contact) +
2D Compatibility (PS) -10032 + (NN) 4466 + (LL) 940
1D Compatibility (HY) -9200 + (ID) 1450
Total energy: -79539.0 ( -121.81 by residue)
QMean score : 0.505
(partial model without unconserved sides chains):
PDB file :
Tito_2OZJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OZJ-query.scw
PDB file :
Tito_Scwrl_2OZJ.pdb
: