Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSDVVEKQTAKSFIMNVLNGLALGTVIVLIPGAILGELMKALLPM--W-----------SGFATLIA-ATAVATSMMGLVIG----IMVGLNFKFNPIQSASLGLA---VMFAGGA-----A------TFLKGAIMLKGTGDIINMGITAALGVLLIQFLSDK------TKSFTL-------IVIPTVTLL-LVGGVGHV-LLPYVKMITTMIGQGI-ASLLG-LQPVLMSILIAMIFCFLIVSPITTVGI--ALA----------------ISLS--GI-----GSGAANLGICAASFGLCM----AG----WSVNSKGTALAHVLGSPK-ISMANVLAKP----KIMLPMISSAAILGILGALFNIQGTPAS--AGFGISGLIGPINALNLAKGGWSVMNMLLIIIIFVAAPIILNFIFNYLFIKVLKIIDPMDYKLDI |
| 3QNQ Chain:A ((14-425)) | ---------GKVAEQRHLLAIR-DGLVLTMPFLIIGSIFLIISTLPIPGYSEFMASLFGKNWNVALGYPVSATFNIMALIAVFGIAYRLGEYYKVDALASGALSLVTFLLATPFQVAYIMPGTKESILVDGVIPAALMGSQGLFVAMIIAIISTEIYRFLVQKKMIIKMPETVPPAVTRSFAALIPGFIVVTVVWIIRLIFEHTTFGSIHNVVGKLLQEPLSILGASLWGAVIAVILVHVLWACGIHGATIVGGVMSPIWLSLMDQNRIAFQAGQDVPNTITAQFFDLWIYMGGSGATLALVVGMLLFARSQQLKSLGRLSIAPGIFNINEMVTFGMPIVMNPLLLIPFIVVPVVLTIVSYFAMEWGLVARPSGAAVTWTTPILFS--GYLGSGG---K-ISGVILQLVNFALAFVIYLPFLKIWDKQKIAEEKGEA---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QNQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -274977 for 2393 contacts (-114.9/contact) +
2D Compatibility (PS) -33104 + (NN) -6563 + (LL) 1720
1D Compatibility (HY) -19200 + (ID) 1900
Total energy: -334024.0 ( -139.58 by residue)
QMean score : 0.087
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