Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSEFTFEIVEKLLVLSENEKGWTKELNRVSFNGAPAKFDLRTWSPDHTKMGKGITLSNEEFKVILDAFRK
4G06 Chain:A ((12-77))
---FTFEIEEHLLTLSENEKGWTKEINRVSFNGAPAKFDIRAWSPDHTKMGKGITLSNEEFQTMVDAFKG
General information:
TITO was launched using:
RESULT:
Template:
4G06.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2383 for 387 contacts (-6.2/contact) +
2D Compatibility (PS) -6665 + (NN) -537 + (LL) 284
1D Compatibility (HY) -6800 + (ID) 2750
Total energy: -18851.0 ( -48.71 by residue)
QMean score : 0.377
(partial model without unconserved sides chains):
PDB file :
Tito_4G06.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4G06-query.scw
PDB file :
Tito_Scwrl_4G06.pdb
: